Oligonucleotide Probes Specific for HSV-2 Transcripts
| Name | Location (5'-3') HG52 |
G+C | HSV-1 equivalent |
| UL1 | 9597-9665 | 56 | U1 |
| UL2 | 10861-10935 | 60 | |
| UL3 | 11693-11767 | 56 | U3 |
| UL4 | 12022-11948 | 57 | U4-5' |
| UL5 | 12849-12775 | 59 | UL4/5 |
| UL6 | 16698-16772 | 55 | UL6/7 |
| UL7 | 18080-18154 | 55 | UL8/9 |
| UL8 | 18587-18513 | 71 | UL8-5' |
| UL9 | 23010-22936 | 61 | |
| UL10 | 24529-24603 | 68 | U10 |
| UL11 | 25027-24953 | 57 | |
| UL12 | 25554-25480 | 57 | |
| UL13 | 27470-27396 | 61 | |
| UL14 | 28438-28364 | 63 | |
| UL15 | 34569-34643 | 59 | U15 |
| UL16 | 31002-30928 | 60 | U16/17 |
| UL17 | 31557-31483 | 61 | |
| UL18 | 35963-35889 | 67 | |
| UL19 | 38721-38647 | 61 | U19-5' |
| UL20 | 41451-41377 | 60 | |
| UL21 | 43172-43246 | 73 | U21 |
| UL22 | 44241-44167 | 60 | U22 |
| UL23 | 47730-47656 | 65 | U23 |
| UL24 | 48157-48231 | 57 | U24 |
| UL25 | 49037-49111 | 61 | U25 |
| UL26 | 51710-51784 | 63 | |
| UL27 | 53565-53491 | 61 | U27-5' |
| UL28 | 56541-56467 | 56 | U27/8 |
| UL29 | 59885-59811 | 59 | U29 |
| UL30 | 64574-64648 | 56 | U30 |
| UL31 | 67098-67024 | 59 | |
| UL32 | 69149-69075 | 61 | |
| UL33 | 69958-70022 | 65 | |
| UL34 | 70489-70563 | 71 | |
| UL35 | 71281-71355 | 68 | U35 |
| UL36 | 76005-75931 | 67 | U36 |
| UL37 | 81567-81493 | 63 | U37 |
| UL38 | 85711-85715 | 71 | U38 |
| UL39 | 89303-89377 | 59 | U39-5' |
| UL40 | 91480-91554 | 61 | U39/40 |
| UL41 | 92074-92000 | 55 | U41 |
| UL42 | 93858-93932 | 64 | U42 |
| UL43 | 96386-96460 | 63 | U43 |
| UL44 | 98347-98421 | 68 | U44-5' |
| UL45 | 99020-99094 | 57 | U44/45 |
| UL46 | 99447-99373 | 61 | U46/47 |
| UL47 | 101832-101758 | 65 | |
| UL48 | 105596-105522 | 61 | U48 |
| UL49 | 106499-106425 | 63 | U49 |
| UL49.5 | 107597-107523 | 56 | |
| UL50 | 108738-108812 | 64 | U50 |
| UL51 | 109506-109432 | 64 | U51 |
| UL52 | 112250-112354 | 59 | U52-5' |
| UL53 | 113964-114038 | 63 | U52/53 |
| UL54 | 116053-116127 | 49 | U54f |
| UL55 | 116692-116766 | 57 | U55 |
| UL56 | 117497-117423 | 63 | U56 |
| LAT 5' end | 119544-119618 | 71 | RLAT-5' |
| LAT intron | 120761-120835 | 63 | RLAT-I |
| ICP0 | 124126-124052 | 57 | RICP0 |
| ICP34.5 | 125697-125622 | 67 | RICP34.5 |
| ORFOP | 125090-125164 | 61 | ROP |
| LAT-3' | 127878-127940 | 73 | RLAT-3' |
| ICP4 | 131370-131296 | 71 | RICP4 |
| US1/ICP22 | 134549-134623 | 64 | R/S22 |
| US3 | 137305-137379 | 61 | US3-5' |
| US4 | 139752-139826 | 61 | US3/4 |
| US5 | 140507-140581 | 64 | US5-5' |
| US6 | 141347-141421 | 56 | |
| US7 | 143348-143423 | 65 | US5/6/7 |
| US8 | 144493-144567 | 59 | US8-5' |
| US8a | 145339-145413 | 57 | N/A |
| US9 | 146062-146136 | 60 | US8/9 |
| US10 | 147063-146989 | 67 | US10/11/12 |
| US11 | 147699-147625 | 67 | |
| US12 | 148035-147961 | 55 |